Make -j4 hanging when building UFS model

Submitted by htan2013 on Wed, 09/01/2021 - 15:53
Forums
Short-Range Weather/Convection Allowing Application

Hello all,

I have compiled NCEPLIBS and NCEPLIBS-external in Cori, NERSC.

I have setup the environment by "source ${INSTALL_PREFIX}/bin/setenv_nceplibs.sh", all libs are checked.

 

However, when I tried to compile the model with the command "make -j8 | tee log.make", the whole thing was hanging at EMC_post for 2 hours.


-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_ctlblk.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/icingpotential.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_config.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/native_endianness.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/libnceppost.a
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-config.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-config-version.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-targets.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-targets-release.cmake
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/share/postxconfig-NT-GFS.txt
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/share/postxconfig-NT-GFS-F00.txt
[ 87%] Completed 'EMC_post'
[ 87%] Built target EMC_post
 

I am still waiting since the website said it may take hours (very unlikely on Cori I think).

I have attached log.cmake and log.make if anyone needed.

Any help is much appreciated.

 

Regards,

Haochen

 

Permalink

Submitted by kavulich on Wed, 09/01/2021 - 17:19

Haochen,

 

Can you attach the full make log? It seems like one of the other utilities is hanging prior to EMC_post, either the weather model or UFS_UTILS.

Permalink

Submitted by htan2013 on Wed, 09/01/2021 - 18:15

Hi, I have attached log.make

Scanning dependencies of target UFS_UTILS
Scanning dependencies of target EMC_post
Scanning dependencies of target ufs_weather_model
[  4%] Creating directories for 'UFS_UTILS'
[  8%] Creating directories for 'EMC_post'
[ 12%] Creating directories for 'ufs_weather_model'
[ 16%] No download step for 'ufs_weather_model'
[ 20%] No download step for 'EMC_post'
[ 25%] No download step for 'UFS_UTILS'
[ 29%] No update step for 'ufs_weather_model'
[ 33%] No update step for 'EMC_post'
[ 37%] No update step for 'UFS_UTILS'
[ 41%] No patch step for 'ufs_weather_model'
[ 45%] No patch step for 'EMC_post'
[ 50%] No patch step for 'UFS_UTILS'
[ 58%] Performing configure step for 'ufs_weather_model'
[ 58%] Performing configure step for 'EMC_post'
[ 62%] Performing configure step for 'UFS_UTILS'
-- The C compiler identification is Intel 19.0.0.20190206
-- The Fortran compiler identification is Intel 19.0.0.20190206
-- Detecting Fortran compiler ABI info
-- The Fortran compiler identification is Intel 19.0.0.20190206
-- Detecting C compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 - skipped
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting Fortran compiler ABI info
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90 - yes
-- Setting build type to 'Release' as none was specified.
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 - skipped
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90 - yes
-- Setting build type to 'Release' as none was specified.
-- Found NetCDF: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/include (found version "4.7.4") found components: C Fortran 
-- FindNetCDF defines targets:
--   - NetCDF_VERSION [4.7.4]
--   - NetCDF_PARALLEL [FALSE]
--   - NetCDF_C_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nc-config]
--   - NetCDF::NetCDF_C [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdf.a 
--   - NetCDF_Fortran_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nf-config]
--   - NetCDF::NetCDF_Fortran [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdff.a 
-- Found MPI_C: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpicc (found version "3.1") 
-- Found MPI_Fortran: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found NetCDF: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/include (found version "4.7.4") found components: Fortran 
-- FindNetCDF defines targets:
--   - NetCDF_VERSION [4.7.4]
--   - NetCDF_PARALLEL [FALSE]
--   - NetCDF_C_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nc-config]
--   - NetCDF::NetCDF_C [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdf.a 
--   - NetCDF_Fortran_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nf-config]
--   - NetCDF::NetCDF_Fortran [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdff.a 
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found ZLIB: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libz.a (found version "1.2.11") 
-- Found PNG: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libpng.a (found version "1.6.35") 
-- Found g2: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/g2-3.4.1/lib/libg2_4.a (found version "3.4.0")
-- Found g2tmpl: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/g2tmpl-1.9.1/lib/libg2tmpl.a (found version "1.9.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found MPI_Fortran: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 (found version "3.1") 
-- Found MPI: TRUE (found version "3.1") found components: C Fortran 
-- Found ESMF library: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libesmf.a
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0") found components: Fortran 
-- Found ip: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/ip-3.3.3/lib/libip_4.a (found version "3.3.3")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found sp: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sp-2.3.3/lib/libsp_4.a (found version "2.3.3")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found MPI: TRUE (found version "3.1") found components: Fortran 
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found w3emc: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3emc-2.7.3/lib/libw3emc_4.a (found version "2.7.3")
-- Found crtm: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/crtm-2.3.0/lib/libcrtm.a (found version "2.3.0")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found sfcio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sfcio-1.4.1/lib/libsfcio.a (found version "1.4.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found gfsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/gfsio-1.4.1/lib/libgfsio.a (found version "1.4.0")
-- Configuring done
-- Generating done
-- Build files have been written to: /global/homes/h/htan2013/UFS/ufs-srweather-app/build/src/EMC_post/src/EMC_post-build
[ 66%] Performing build step for 'EMC_post'
Scanning dependencies of target nceppost
[  0%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CTLBLK.f.o
[  0%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CMASSI.f.o
[  1%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/machine.f.o
[  1%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GRIDSPEC.f.o
[  2%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MASKS_mod.f.o
[  2%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/LOOKUP.f.o
[  2%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/PMICRPH.f.o
[  3%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/RHGRD.f.o
[  4%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/RQSTFLD.F.o
[  5%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/SOIL_mod.f.o
[  5%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/VRBLS2D_mod.f.o
[  6%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/VRBLS3D_mod.f.o
[  7%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/VRBLS4D_mod.f.o
[  8%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/cuparm.f.o
[  9%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_ctlblk.f90.o
[ 10%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_config.f90.o
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0") found components: Fortran 
-- Found gfsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/gfsio-1.4.1/lib/libgfsio.a (found version "1.4.0")
-- Found sfcio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sfcio-1.4.1/lib/libsfcio.a (found version "1.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
[ 10%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_filter.f90.o
-- Found landsfcutil: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/landsfcutil-2.4.1/lib/liblandsfcutil_4.a (found version "2.4.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
[ 11%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_indices.f90.o
-- Found MPI: TRUE (found version "3.1") found components: Fortran 
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found nemsiogfs: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsiogfs-2.5.3/lib/libnemsiogfs.a (found version "2.5.3")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found sp: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sp-2.3.3/lib/libsp_4.a (found version "2.3.3")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found ip: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/ip-3.3.3/lib/libip_4.a (found version "3.3.3")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found w3emc: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3emc-2.7.3/lib/libw3emc_4.a (found version "2.7.3")
-- Found ZLIB: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libz.a (found version "1.2.11") 
-- Found PNG: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libpng.a (found version "1.6.35") 
-- Found g2: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/g2-3.4.1/lib/libg2_4.a (found version "3.4.0")
[ 12%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/kinds_mod.F.o
[ 13%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/params.F.o
-- Found JPEG: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libjpeg.a (found version "90") 
-- Found Jasper: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib/libjasper.a (found version "1.900.1") 
[ 13%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/svptbl.f.o
[ 13%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_BOURG.f.o
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[ 14%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GET_BITS.f.o
-- Found OpenMP_C: -qopenmp (found version "5.0") 
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0")  
-- Found wgrib2: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/wgrib2-2.0.8/lib/libwgrib2.a (found version 2.9.0)
-- Configuring done
[ 15%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GETGBANDSCATTER.f.o
-- Generating done
-- Build files have been written to: /global/homes/h/htan2013/UFS/ufs-srweather-app/build/src/UFS_UTILS/src/UFS_UTILS-build
[ 16%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_algo.f90.o
[ 70%] Performing build step for 'UFS_UTILS'
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[ 19%] Linking C static library libshared_lib.a
[ 19%] Built target shared_lib
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Scanning dependencies of target regional_esg_grid
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[ 31%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/psym2.f90.o
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[ 34%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pmat2.f90.o
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Scanning dependencies of target chgres_cube
[ 36%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/program_setup.f90.o
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[ 39%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/search_util.f90.o
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[ 28%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALCAPE2.f.o
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[ 32%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALLCL.f.o
[ 33%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALMCVG.f.o
[ 33%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALMICT.f.o
[ 53%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/regional_esg_grid.f90.o
[ 34%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALPBL.f.o
[ 54%] Linking Fortran executable regional_esg_grid
[ 34%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALPBLREGIME.f.o
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[ 36%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALPW.f.o
[ 36%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALRAD_WCLOUD_newcrtm.f.o
[ 37%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALRCH.f.o
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Scanning dependencies of target orog
[ 56%] Building Fortran object sorc/orog_mask_tools.fd/orog.fd/CMakeFiles/orog.dir/mtnlm7_oclsm.f.o
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[ 59%] Built target orog
[ 38%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALRH_GFS.f.o
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[ 66%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/model_grid.F90.o
[ 40%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALTAU.f.o
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[ 68%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/driver.F90.o
[ 42%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALVESSEL.f.o
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[ 69%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/interp.F90.o
[ 43%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALVIS_GSD.f.o
[ 44%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALVOR.f.o
[ 71%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/output.f90.o
[ 72%] Linking Fortran executable sfc_climo_gen
[ 45%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_DOMINANT.f.o
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[ 46%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT.f.o
[ 47%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_RAMER.f.o
[ 47%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_REVISED.f.o
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[ 48%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CANRES.f.o
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[ 74%] Building Fortran object sorc/vcoord_gen.fd/CMakeFiles/vcoord_gen.dir/driver.f90.o
[ 49%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CLDFRAC_ZHAO.f.o
[ 75%] Building Fortran object sorc/vcoord_gen.fd/CMakeFiles/vcoord_gen.dir/matrix_utils.f90.o
[ 49%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CLDRAD.f.o
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[ 78%] Linking Fortran executable vcoord_gen
[ 78%] Built target vcoord_gen
[ 50%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CLMAX.f.o
[ 51%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/COLLECT.f.o
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[ 80%] Building C object sorc/fre-nctools.fd/tools/make_solo_mosaic/CMakeFiles/make_solo_mosaic.dir/make_solo_mosaic.c.o
[ 81%] Building C object sorc/fre-nctools.fd/tools/make_solo_mosaic/CMakeFiles/make_solo_mosaic.dir/get_contact.c.o
[ 83%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/atmosphere.F90.o
[ 84%] Linking C executable make_solo_mosaic
[ 84%] Built target make_solo_mosaic
[ 52%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/COLLECT_LOC.f.o
[ 86%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/surface.F90.o
[ 52%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/DEALLOCATE.f.o
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[ 87%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/create_conformal_cubic_grid.c.o
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[ 92%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/create_lonlat_grid.c.o
[ 93%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/make_hgrid.c.o
[ 95%] Linking C executable make_hgrid
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[ 53%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/DEWPOINT.f.o
[ 54%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/ETAMP_Q2F.f.o
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[ 56%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/get_postfilename.f.o
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[ 67%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/PARAMR.f.o
[ 68%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/PROCESS.f.o
[ 68%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/READCNTRL.F.o
[ 68%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/SCLFLD.f.o
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[ 69%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/TRPAUS.f.o
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[ 70%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/WETBULB.f.o
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[ 72%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/ZENSUN.f.o
[ 73%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/physcons.f.o
[ 74%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/FILL_PSETFLD.f.o
[ 75%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/SET_LVLSXML.f.o
[ 76%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/grib2_module.f.o
[ 77%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/BNDLYR.f.o
[ 78%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/FDLVL.f.o
[100%] Linking Fortran executable chgres_cube
[ 78%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/FRZLVL2.f.o
[ 79%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/FRZLVL.f.o
[ 79%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GFSPOST.F.o
[ 80%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/ICAOHEIGHT.f.o
[ 80%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/LFMFLD.f.o
[ 81%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2P.f.o
[ 81%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2THANDPV.f.o
[100%] Built target chgres_cube
[ 75%] Performing install step for 'UFS_UTILS'
[ 15%] Built target shared_lib
[ 18%] Built target shave
[ 21%] Built target filter_topo
[ 39%] Built target regional_esg_grid
[ 42%] Built target global_equiv_resol
[ 62%] Built target chgres_cube
[ 66%] Built target orog
[ 80%] Built target sfc_climo_gen
[ 86%] Built target vcoord_gen
[ 90%] Built target make_solo_mosaic
[100%] Built target make_hgrid
Install the project...
-- Install configuration: "Release"
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/make_solo_mosaic
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/make_hgrid
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/shave
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/filter_topo
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/regional_esg_grid
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/global_equiv_resol
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/chgres_cube
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/orog
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/sfc_climo_gen
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/vcoord_gen
[ 79%] Completed 'UFS_UTILS'
[ 79%] Built target UFS_UTILS
[ 82%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/SURFCE.f.o
[ 83%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GFIP3.f.o
[ 84%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2STD_P.f.o
[ 84%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MISCLN.f.o
[ 85%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/READ_xml.f.o
[ 85%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/SET_OUTFLDS.f.o
[ 86%] Linking Fortran static library libnceppost.a
[ 86%] Built target nceppost
Scanning dependencies of target ncep_post
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/intio_tags.f.o
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/native_endianness.f.o
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/wrf_io_flags.f.o
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/ASSIGNNEMSIOVAR.f.o
[ 88%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/GETNEMSNDSCATTER.f.o
[ 88%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/GFSPOSTSIG.F.o
[ 88%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_GFS.f.o
[ 89%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_GFS_NEMS.f.o
[ 90%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_GFS_NEMS_MPIIO.f.o
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[ 91%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_GFS_NETCDF_PARA.f.o
[ 91%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_GFS_SIGIO.f.o
[ 91%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NETCDF.f.o
[ 92%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NMM.f.o
[ 92%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/TIMEF.f.o
[ 93%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/WRFPOST.f.o
[ 94%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/getlvls.f.o
[ 95%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/retrieve_index.f.o
[ 96%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/io_int_stubs.f.o
[ 97%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST.F.o
[ 98%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NEMS.f.o
[ 99%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NEMS_MPIIO.f.o
[100%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/getIVariableN.f.o
[100%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/getVariable.f.o
[100%] Linking Fortran executable ncep_post
[100%] Built target ncep_post
[ 83%] Performing install step for 'EMC_post'
[ 86%] Built target nceppost
[100%] Built target ncep_post
Install the project...
-- Install configuration: "Release"
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/ncep_post
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/include
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/vrbls4d.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/svptbl_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/vrbls2d.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/masks.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/grib2_module.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/severitymaps.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/ctlblk_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_filter.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/soil.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/params_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/cloudlayers.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/kinds.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/physcons_post.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_indices.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/pmicrph_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/derivedfields.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/xml_perl_data.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/cuparm_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/rhgrd_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/rqstfld_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/vrbls3d.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gridspec_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/machine_post.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/cmassi_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/icingseverity.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/lookup_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_ctlblk.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/icingpotential.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_config.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/native_endianness.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/libnceppost.a
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-config.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-config-version.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-targets.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-targets-release.cmake
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/share/postxconfig-NT-GFS.txt
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/share/postxconfig-NT-GFS-F00.txt
[ 87%] Completed 'EMC_post'
[ 87%] Built target EMC_post
 

Permalink

Submitted by htan2013 on Wed, 09/01/2021 - 19:38

I have tried make -j 1 also, here's what I got:

 

Scanning dependencies of target UFS_UTILS
[  4%] Creating directories for 'UFS_UTILS'
[  8%] No download step for 'UFS_UTILS'
[ 12%] No update step for 'UFS_UTILS'
[ 16%] No patch step for 'UFS_UTILS'
[ 20%] Performing configure step for 'UFS_UTILS'
-- The C compiler identification is Intel 19.0.0.20190206
-- The Fortran compiler identification is Intel 19.0.0.20190206
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 - skipped
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90 - yes
-- Setting build type to 'Release' as none was specified.
-- Found NetCDF: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/include (found version "4.7.4") found components: C Fortran 
-- FindNetCDF defines targets:
--   - NetCDF_VERSION [4.7.4]
--   - NetCDF_PARALLEL [FALSE]
--   - NetCDF_C_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nc-config]
--   - NetCDF::NetCDF_C [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdf.a 
--   - NetCDF_Fortran_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nf-config]
--   - NetCDF::NetCDF_Fortran [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdff.a 
-- Found MPI_C: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpicc (found version "3.1") 
-- Found MPI_Fortran: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 (found version "3.1") 
-- Found MPI: TRUE (found version "3.1") found components: C Fortran 
-- Found ESMF library: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libesmf.a
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0") found components: Fortran 
-- Found gfsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/gfsio-1.4.1/lib/libgfsio.a (found version "1.4.0")
-- Found sfcio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sfcio-1.4.1/lib/libsfcio.a (found version "1.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found landsfcutil: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/landsfcutil-2.4.1/lib/liblandsfcutil_4.a (found version "2.4.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found MPI: TRUE (found version "3.1") found components: Fortran 
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found nemsiogfs: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsiogfs-2.5.3/lib/libnemsiogfs.a (found version "2.5.3")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found sp: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sp-2.3.3/lib/libsp_4.a (found version "2.3.3")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found ip: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/ip-3.3.3/lib/libip_4.a (found version "3.3.3")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found w3emc: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3emc-2.7.3/lib/libw3emc_4.a (found version "2.7.3")
-- Found ZLIB: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libz.a (found version "1.2.11") 
-- Found PNG: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libpng.a (found version "1.6.35") 
-- Found g2: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/g2-3.4.1/lib/libg2_4.a (found version "3.4.0")
-- Found JPEG: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libjpeg.a (found version "90") 
-- Found Jasper: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib/libjasper.a (found version "1.900.1") 
-- Found OpenMP_C: -qopenmp (found version "5.0") 
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0")  
-- Found wgrib2: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/wgrib2-2.0.8/lib/libwgrib2.a (found version 2.9.0)
-- Configuring done
-- Generating done
-- Build files have been written to: /global/homes/h/htan2013/UFS/ufs-srweather-app/build/src/UFS_UTILS/src/UFS_UTILS-build
[ 25%] Performing build step for 'UFS_UTILS'
Scanning dependencies of target shared_lib
[  1%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/create_xgrid.c.o
[  3%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/gradient_c2l.c.o
[  4%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/interp.c.o
[  6%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/mosaic_util.c.o
[  7%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/mpp.c.o
[  9%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/mpp_domain.c.o
[ 10%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/mpp_io.c.o
[ 12%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/read_mosaic.c.o
[ 13%] Building C object sorc/fre-nctools.fd/shared_lib/CMakeFiles/shared_lib.dir/tool_util.c.o
[ 15%] Linking C static library libshared_lib.a
[ 15%] Built target shared_lib
Scanning dependencies of target make_solo_mosaic
[ 16%] Building C object sorc/fre-nctools.fd/tools/make_solo_mosaic/CMakeFiles/make_solo_mosaic.dir/make_solo_mosaic.c.o
[ 18%] Building C object sorc/fre-nctools.fd/tools/make_solo_mosaic/CMakeFiles/make_solo_mosaic.dir/get_contact.c.o
[ 19%] Linking C executable make_solo_mosaic
[ 19%] Built target make_solo_mosaic
Scanning dependencies of target make_hgrid
[ 21%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/create_conformal_cubic_grid.c.o
[ 22%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/create_gnomonic_cubic_grid.c.o
[ 24%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/create_grid_from_file.c.o
[ 25%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/create_lonlat_grid.c.o
[ 27%] Building C object sorc/fre-nctools.fd/tools/make_hgrid/CMakeFiles/make_hgrid.dir/make_hgrid.c.o
[ 28%] Linking C executable make_hgrid
[ 28%] Built target make_hgrid
Scanning dependencies of target shave
[ 30%] Building Fortran object sorc/grid_tools.fd/shave.fd/CMakeFiles/shave.dir/shave_nc.F90.o
[ 31%] Linking Fortran executable shave
[ 31%] Built target shave
Scanning dependencies of target filter_topo
[ 33%] Building Fortran object sorc/grid_tools.fd/filter_topo.fd/CMakeFiles/filter_topo.dir/filter_topo.F90.o
[ 34%] Linking Fortran executable filter_topo
[ 34%] Built target filter_topo
Scanning dependencies of target regional_esg_grid
[ 36%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pkind.f90.o
[ 37%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pietc.f90.o
[ 39%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pietc_s.f90.o
[ 40%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pfun.f90.o
[ 42%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pmat.f90.o
[ 43%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pmat4.f90.o
[ 45%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pmat5.f90.o
[ 46%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/psym2.f90.o
[ 48%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pesg.f90.o
[ 50%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/pmat2.f90.o
[ 51%] Building Fortran object sorc/grid_tools.fd/regional_esg_grid.fd/CMakeFiles/regional_esg_grid.dir/regional_esg_grid.f90.o
[ 53%] Linking Fortran executable regional_esg_grid
[ 53%] Built target regional_esg_grid
Scanning dependencies of target global_equiv_resol
[ 54%] Building Fortran object sorc/grid_tools.fd/global_equiv_resol.fd/CMakeFiles/global_equiv_resol.dir/global_equiv_resol.f90.o
[ 56%] Linking Fortran executable global_equiv_resol
[ 56%] Built target global_equiv_resol
Scanning dependencies of target chgres_cube
[ 57%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/program_setup.f90.o
[ 59%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/model_grid.F90.o
[ 60%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/grib2_util.F90.o
[ 62%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/search_util.f90.o
[ 63%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/input_data.F90.o
[ 65%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/thompson_mp_climo_data.F90.o
[ 66%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/atmosphere.F90.o
[ 68%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/static_data.F90.o
[ 69%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/surface.F90.o
[ 71%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/chgres.F90.o
[ 72%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/utils.f90.o
[ 74%] Building Fortran object sorc/chgres_cube.fd/CMakeFiles/chgres_cube.dir/write_data.F90.o
[ 75%] Linking Fortran executable chgres_cube
[ 75%] Built target chgres_cube
Scanning dependencies of target orog
[ 77%] Building Fortran object sorc/orog_mask_tools.fd/orog.fd/CMakeFiles/orog.dir/mtnlm7_oclsm.f.o
[ 78%] Building Fortran object sorc/orog_mask_tools.fd/orog.fd/CMakeFiles/orog.dir/netcdf_io.F90.o
[ 80%] Linking Fortran executable orog
[ 80%] Built target orog
Scanning dependencies of target sfc_climo_gen
[ 81%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/program_setup.f90.o
[ 83%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/utils.f90.o
[ 84%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/model_grid.F90.o
[ 86%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/source_grid.F90.o
[ 87%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/driver.F90.o
[ 89%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/interp.F90.o
[ 90%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/output.f90.o
[ 92%] Building Fortran object sorc/sfc_climo_gen.fd/CMakeFiles/sfc_climo_gen.dir/search.f90.o
[ 93%] Linking Fortran executable sfc_climo_gen
[ 93%] Built target sfc_climo_gen
Scanning dependencies of target vcoord_gen
[ 95%] Building Fortran object sorc/vcoord_gen.fd/CMakeFiles/vcoord_gen.dir/driver.f90.o
[ 96%] Building Fortran object sorc/vcoord_gen.fd/CMakeFiles/vcoord_gen.dir/matrix_utils.f90.o
[ 98%] Building Fortran object sorc/vcoord_gen.fd/CMakeFiles/vcoord_gen.dir/vcoord_gen.f90.o
[100%] Linking Fortran executable vcoord_gen
[100%] Built target vcoord_gen
[ 29%] Performing install step for 'UFS_UTILS'
[ 15%] Built target shared_lib
[ 19%] Built target make_solo_mosaic
[ 28%] Built target make_hgrid
[ 31%] Built target shave
[ 34%] Built target filter_topo
[ 53%] Built target regional_esg_grid
[ 56%] Built target global_equiv_resol
[ 75%] Built target chgres_cube
[ 80%] Built target orog
[ 93%] Built target sfc_climo_gen
[100%] Built target vcoord_gen
Install the project...
-- Install configuration: "Release"
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/make_solo_mosaic
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/make_hgrid
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/shave
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/filter_topo
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/regional_esg_grid
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/global_equiv_resol
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/chgres_cube
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/orog
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/sfc_climo_gen
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/vcoord_gen
[ 33%] Completed 'UFS_UTILS'
[ 33%] Built target UFS_UTILS
Scanning dependencies of target EMC_post
[ 37%] Creating directories for 'EMC_post'
[ 41%] No download step for 'EMC_post'
[ 45%] No update step for 'EMC_post'
[ 50%] No patch step for 'EMC_post'
[ 54%] Performing configure step for 'EMC_post'
-- The Fortran compiler identification is Intel 19.0.0.20190206
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 - skipped
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90
-- Checking whether /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 supports Fortran 90 - yes
-- Setting build type to 'Release' as none was specified.
-- Found MPI_Fortran: /global/common/software/m3169/cori/openmpi/4.0.2/intel/bin/mpif90 (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found NetCDF: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/include (found version "4.7.4") found components: Fortran 
-- FindNetCDF defines targets:
--   - NetCDF_VERSION [4.7.4]
--   - NetCDF_PARALLEL [FALSE]
--   - NetCDF_C_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nc-config]
--   - NetCDF::NetCDF_C [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdf.a 
--   - NetCDF_Fortran_CONFIG_EXECUTABLE [/global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bin/nf-config]
--   - NetCDF::NetCDF_Fortran [STATIC] [Root: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0] Lib: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libnetcdff.a 
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found ZLIB: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libz.a (found version "1.2.11") 
-- Found PNG: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/lib64/libpng.a (found version "1.6.35") 
-- Found g2: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/g2-3.4.1/lib/libg2_4.a (found version "3.4.0")
-- Found g2tmpl: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/g2tmpl-1.9.1/lib/libg2tmpl.a (found version "1.9.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0") found components: Fortran 
-- Found ip: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/ip-3.3.3/lib/libip_4.a (found version "3.3.3")
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found sp: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sp-2.3.3/lib/libsp_4.a (found version "2.3.3")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found MPI: TRUE (found version "3.1") found components: Fortran 
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found w3emc: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3emc-2.7.3/lib/libw3emc_4.a (found version "2.7.3")
-- Found crtm: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/crtm-2.3.0/lib/libcrtm.a (found version "2.3.0")
-- Found sigio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sigio-2.3.2/lib/libsigio.a (found version "2.3.0")
-- Found sfcio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/sfcio-1.4.1/lib/libsfcio.a (found version "1.4.0")
-- Found bacio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/bacio-2.4.1/lib/libbacio_4.a (found version "2.4.0")
-- Found w3nco: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/w3nco-2.4.1/lib/libw3nco_4.a (found version "2.4.0")
-- Found nemsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/nemsio-2.5.2/lib/libnemsio.a (found version "2.5.1")
-- Found gfsio: /global/homes/h/htan2013/NCEPLIBS-ufs-v2.0.0/gfsio-1.4.1/lib/libgfsio.a (found version "1.4.0")
-- Configuring done
-- Generating done
-- Build files have been written to: /global/homes/h/htan2013/UFS/ufs-srweather-app/build/src/EMC_post/src/EMC_post-build
[ 58%] Performing build step for 'EMC_post'
Scanning dependencies of target nceppost
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[  6%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/RQSTFLD.F.o
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[ 27%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALPBL.f.o
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[ 28%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALPOT.f.o
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[ 34%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALTHTE.f.o
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[ 36%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALVIS.f.o
[ 36%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALVIS_GSD.f.o
[ 37%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALVOR.f.o
[ 37%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_BOURG.f.o
[ 38%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_DOMINANT.f.o
[ 39%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_EXPLICIT.f.o
[ 39%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT.f.o
[ 40%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_RAMER.f.o
[ 40%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CALWXT_REVISED.f.o
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[ 42%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CLDRAD.f.o
[ 43%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/CLMAX.f.o
[ 44%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/COLLECT.f.o
[ 45%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/COLLECT_LOC.f.o
[ 45%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/DEALLOCATE.f.o
[ 46%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/DEWPOINT.f.o
[ 46%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/ETCALC.f.o
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[ 48%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/EXCH2.f.o
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[ 51%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/FIXED.f.o
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[ 53%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GET_BITS.f.o
[ 54%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GETGBANDSCATTER.f.o
[ 54%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/get_postfilename.f.o
[ 54%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GFSPOST.F.o
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[ 55%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GRIBIT.F.o
[ 56%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/GRIDAVG.f.o
[ 57%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_algo.f90.o
[ 57%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_compute.f90.o
[ 57%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/gtg_smoothseams.f90.o
[ 58%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/ICAOHEIGHT.f.o
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[ 60%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2AGL.f.o
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[ 62%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2SIGMA2.f.o
[ 62%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2SIGMA.f.o
[ 63%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2STD_P.f.o
[ 63%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MDL2THANDPV.f.o
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[ 67%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MPI_LAST.f.o
[ 67%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/MSFPS.f.o
[ 68%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/NGMFLD.f.o
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[ 69%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/OTLIFT.f.o
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[ 71%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/POLEAVG.f.o
[ 72%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/PROCESS.f.o
[ 72%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/READCNTRL.F.o
[ 73%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/READ_xml.f.o
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[ 83%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/TTBLEX.f.o
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[ 85%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/nceppost.dir/ZENSUN.f.o
[ 86%] Linking Fortran static library libnceppost.a
[ 86%] Built target nceppost
Scanning dependencies of target ncep_post
[ 86%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/intio_tags.f.o
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/native_endianness.f.o
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/wrf_io_flags.f.o
[ 87%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/ASSIGNNEMSIOVAR.f.o
[ 88%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/GETNEMSNDSCATTER.f.o
[ 88%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/GFSPOSTSIG.F.o
[ 89%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST.F.o
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[ 93%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NEMS.f.o
[ 94%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NEMS_MPIIO.f.o
[ 94%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NETCDF.f.o
[ 95%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/INITPOST_NMM.f.o
[ 95%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/TIMEF.f.o
[ 96%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/WRFPOST.f.o
[ 97%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/getIVariableN.f.o
[ 97%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/getVariable.f.o
[ 98%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/getlvls.f.o
[ 99%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/retrieve_index.f.o
[100%] Building Fortran object sorc/ncep_post.fd/CMakeFiles/ncep_post.dir/io_int_stubs.f.o
[100%] Linking Fortran executable ncep_post
[100%] Built target ncep_post
[ 62%] Performing install step for 'EMC_post'
[ 86%] Built target nceppost
[100%] Built target ncep_post
Install the project...
-- Install configuration: "Release"
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/bin/ncep_post
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/include
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/vrbls4d.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/svptbl_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/vrbls2d.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/masks.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/grib2_module.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/severitymaps.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/ctlblk_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_filter.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/soil.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/params_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/cloudlayers.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/kinds.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/physcons_post.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_indices.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/pmicrph_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/derivedfields.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/xml_perl_data.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/cuparm_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/rhgrd_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/rqstfld_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/vrbls3d.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gridspec_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/machine_post.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/cmassi_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/icingseverity.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/lookup_mod.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_ctlblk.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/icingpotential.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/gtg_config.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/include/native_endianness.mod
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/libnceppost.a
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-config.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-config-version.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-targets.cmake
-- Installing: /global/homes/h/htan2013/UFS/ufs-srweather-app/lib/cmake/nceppost/nceppost-targets-release.cmake
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/share/postxconfig-NT-GFS.txt
-- Up-to-date: /global/homes/h/htan2013/UFS/ufs-srweather-app/share/postxconfig-NT-GFS-F00.txt
[ 66%] Completed 'EMC_post'
[ 66%] Built target EMC_post
Scanning dependencies of target ufs_weather_model
[ 70%] Creating directories for 'ufs_weather_model'
[ 75%] No download step for 'ufs_weather_model'
[ 79%] No update step for 'ufs_weather_model'
[ 83%] No patch step for 'ufs_weather_model'
[ 87%] Performing configure step for 'ufs_weather_model'
 

 

Any helps would be appreciated, thank you

Permalink

Submitted by kavulich on Mon, 09/20/2021 - 21:33

Haochen,

I am sorry you are still having this issue. This is a strange problem I have not encountered before; it appears as if the UFS_UTILS and EMC_post are building successfully, but the weather model build is hanging at the configure step.

I am curious, can you try to build the weather model on its own, outside the app framework? The instructions for building the weather model individually are here: https://ufs-weather-model.readthedocs.io/en/ufs-v2.0.0/BuildingAndRunning.html

- Mike

Permalink

Submitted by htan2013 on Mon, 09/20/2021 - 21:39

Hi Mike,

Thank you so much for your reply!

I have asked an expert in cmake and he has helped me solved this issue by some options:

For NCEPLIBS-external, I used:
cmake -DBUILD_MPI=OFF -DMPITYPE=default -DCMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} ..
make -j 8 | tee log.make

 

For NCEPLIBS, I used:

 

cmake -DOPENMP=ON -DCMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} ..
make -j 8 | tee log.make
make deploy

 

After the modification, I am able to build UFS without this hanging issue.

 

Best regards,

Haochen

Permalink

Submitted by kavulich on Tue, 09/21/2021 - 15:13

Haochen, thanks for your response. I also see that you opened an issue in the repository (https://github.com/ufs-community/ufs-srweather-app/issues/169); thanks for doing that! There is a training even this week so most UFS SRW developers are busy, but we will be sure to address this soon.

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